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The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing

Lightbody, Gaye, Browne, Fiona, Zheng, Huiru, Haberland, Valeriia and Blayney, Jaine (2017) The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. In: The Proceedings of the 2016 IEEE International Conference on Bioinformatics and Biomedicine: The 3rd Workshop on High Performance Computing on Bioinformatics (HPCB 2016), Shenzhen, China. IEEE. 6 pp. [Conference contribution]

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URL: http://ieeexplore.ieee.org/document/7822643/

DOI: 10.1109/BIBM.2016.7822643

Abstract

We have reached the era of full genome sequencing using high throughput sequencing technologies pouring out gigabases of reads in a day. To fully benefit from such a profusion of data high performance tools and systems are needed to extract the information lying within the sequences. This paper provides an overview of the evolution of high-throughput sequencing and the tools, infrastructure and data management developing in this space to support a key area in personalized medicine. The paper concludes by providing an outlook in the future of such technologies and their applications and how they might shape clinical governance.

Item Type:Conference contribution (Paper)
Keywords:high-throughput sequencing; grid; cloud; personalised medicine
Faculties and Schools:Faculty of Computing & Engineering
Faculty of Computing & Engineering > School of Computing and Mathematics
Research Institutes and Groups:Computer Science Research Institute > Smart Environments
Computer Science Research Institute
Computer Science Research Institute > Artificial Intelligence and Applications
ID Code:36263
Deposited By: Dr Gaye Lightbody
Deposited On:27 Jan 2017 10:37
Last Modified:27 Jan 2017 10:37

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